MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus murinus
LAC.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 225
bases: 2,084,440 bps
CDS: 1,985
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,059
Total number of protein coding genes annotated/found:
1,985
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5005|JADGKI010000122.1
SEQF5005_00271
Genome Viewer
NA
AA
525/175
10175-9651
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00272
Genome Viewer
NA
AA
444/148
10788-10345
Putative universal stress protein
SEQF5005|JADGKI010000122.1
SEQF5005_00273
Genome Viewer
NA
AA
447/149
11333-10887
Transcriptional repressor CopY
SEQF5005|JADGKI010000122.1
SEQF5005_00274
Genome Viewer
NA
AA
849/283
11498-12346
Undecaprenyl-diphosphatase
SEQF5005|JADGKI010000122.1
SEQF5005_00275
Genome Viewer
NA
AA
612/204
12596-13207
Protein DedA
SEQF5005|JADGKI010000122.1
SEQF5005_00276
Genome Viewer
NA
AA
1176/392
14412-13237
Cyclopropane-fatty-acyl-phospholipid synthase
SEQF5005|JADGKI010000122.1
SEQF5005_00277
Genome Viewer
NA
AA
2196/732
16691-14496
ATP-dependent RecD-like DNA helicase
SEQF5005|JADGKI010000122.1
SEQF5005_00278
Genome Viewer
NA
AA
300/100
16824-17123
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00279
Genome Viewer
NA
AA
2082/694
19268-17187
DNA topoisomerase 3
SEQF5005|JADGKI010000122.1
SEQF5005_00280
Genome Viewer
NA
AA
552/184
19927-19376
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00281
Genome Viewer
NA
AA
663/221
20643-19981
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00282
Genome Viewer
NA
AA
1140/380
21909-20770
Cystathionine gamma-synthase
SEQF5005|JADGKI010000122.1
SEQF5005_00283
Genome Viewer
NA
AA
933/311
22842-21910
Cysteine synthase
SEQF5005|JADGKI010000122.1
SEQF5005_00284
Genome Viewer
NA
AA
477/159
23156-23632
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00285
Genome Viewer
NA
AA
126/42
23996-23871
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00286
Genome Viewer
NA
AA
258/86
24470-24213
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00287
Genome Viewer
NA
AA
459/153
24943-24485
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00288
Genome Viewer
NA
AA
444/148
25397-24954
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00289
Genome Viewer
NA
AA
669/223
26062-25394
hypothetical protein
SEQF5005|JADGKI010000122.1
SEQF5005_00290
Genome Viewer
NA
AA
1632/544
27712-26081
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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